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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8140875 chr22:19840591 C/G THAP7 chr22:21353393-21356485:- 0.52 6.75 4.22E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G THOC5 chr22:29901868-29951205:- 0.54 6.3 6.77E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G TOM1 chr22:35695268-35743987:+ 0.7 6.44 2.87E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G TOMM22 chr22:39077953-39081426:+ 0.61 6.06 2.7E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G TRABD chr22:50624344-50638027:+ 0.59 6.41 3.58E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G TTLL1 chr22:43435650-43485434:- 0.63 5.98 4.3E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G TXN2 chr22:36863083-36878077:- 0.68 7.7 8.02E-14 Box Plot
THCA rs8140875 chr22:19840591 C/G UBE2L3 chr22:21903736-21978323:+ 0.64 6.63 8.98E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G UQCR10 chr22:30163358-30166402:+ 0.55 7.55 2.27E-13 Box Plot
THCA rs8140875 chr22:19840591 C/G XRCC6 chr22:42017123-42060052:+ 0.58 5.94 5.58E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G YPEL1 chr22:22051833-22090123:- 0.65 6.37 4.47E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G ZMAT5 chr22:30126945-30163000:- 0.52 6.72 5.23E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G ZNF70 chr22:24080865-24093279:- 0.69 6.72 5.28E-11 Box Plot
THCA rs8142343 chr22:34505878 A/G CYTSA chr22:24666786-24813707:+ -0.41 -5.96 4.83E-9 Box Plot
THCA rs8142343 chr22:34505878 A/G UQCR10 chr22:30163358-30166402:+ -0.41 -6.83 2.61E-11 Box Plot